Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AKB65168.1Type I restriction-modification system specificity subunit. (406 aa)    
Predicted Functional Partners:
AKB65167.1
Type I restriction-modification system specificity subunit.
 
 0.978
AKB64070.1
Type I restriction-modification system, DNA-methyltransferase subunit M.
 
 0.905
AKB65173.1
Type I restriction-modification system, restriction subunit R.
 
  
 0.873
AKB64068.1
Type I restriction-modification system, restriction subunit R.
 
  
 0.838
AKB63748.1
Type I restriction-modification system, DNA-methyltransferase subunit M.
 
 0.831
AKB65694.1
Type I restriction-modification system, DNA-methyltransferase subunit M.
 
 
 0.733
AKB65169.1
Hypothetical protein.
       0.704
AKB64732.1
Type I restriction-modification system, DNA-methyltransferase subunit M.
 
 0.693
AKB65691.1
Type I restriction-modification system, restriction subunit R.
 
  
 0.680
AKB65199.1
Type I restriction-modification system, DNA-methyltransferase subunit M.
  
 
 0.623
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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