STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65187.1Phosphoesterase. (329 aa)    
Predicted Functional Partners:
engB
GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation.
 
     0.920
AKB64283.1
Single-stranded-DNA-specific exonuclease RecJ.
  
  
 
0.910
AKB65907.1
Single-stranded-DNA-specific exonuclease RecJ.
  
  
 
0.906
AKB66069.1
Hypothetical protein.
 
 
 
 0.742
AKB65890.1
Hypothetical protein.
 
     0.569
polB
Archaeal DNA polymerase II small subunit; Possesses two activities: a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase; Belongs to the DNA polymerase delta/II small subunit family.
  
 
 
 0.540
AKB64762.1
Hypothetical protein.
  
     0.535
AKB63931.1
Hypothetical protein.
 
     0.533
AKB65599.1
Hypothetical protein.
  
     0.526
AKB65876.1
PQQ enzyme repeat domain protein.
 
     0.485
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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