STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65223.1Hypothetical protein. (446 aa)    
Predicted Functional Partners:
AKB65225.1
Hypothetical protein.
 
     0.783
AKB66153.1
Hypothetical protein.
  
     0.721
AKB66220.1
Hypothetical protein.
  
     0.712
AKB63354.1
Hypothetical protein.
  
     0.701
AKB66237.1
Hypothetical protein.
  
     0.699
AKB64414.1
Hypothetical protein.
  
     0.685
AKB64637.1
Hypothetical protein.
  
     0.683
AKB63638.1
Hypothetical protein.
  
     0.674
AKB65877.1
PQQ enzyme repeat domain protein.
  
     0.667
AKB65876.1
PQQ enzyme repeat domain protein.
  
     0.666
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.