STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65234.1ABC transporter, ATP-binding protein. (265 aa)    
Predicted Functional Partners:
AKB64782.1
Cell division protein FtsX.
 0.975
AKB66233.1
ABC transporter, permease protein.
 0.969
AKB63553.1
ABC transporter, permease protein.
 0.964
AKB64864.1
ABC transporter, permease protein.
 0.964
AKB63549.1
ABC transporter, permease protein.
 0.955
AKB65235.1
ABC transporter, permease protein.
 
 0.954
AKB65020.1
ABC transporter, permease protein.
 0.925
AKB66256.1
ABC transporter, permease protein.
 0.901
AKB64555.1
Oligopeptide transport system permease protein OppB; TCDB 3.A.1.5.1.
  
0.712
AKB65332.1
ABC transporter, ATP-binding protein.
 
  
0.637
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.