STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB65236.1Putative carboxyl-terminal-processing protease, deltaproteobacterial. (424 aa)    
Predicted Functional Partners:
AKB65235.1
ABC transporter, permease protein.
 
    0.894
AKB66237.1
Hypothetical protein.
  
     0.682
AKB63354.1
Hypothetical protein.
  
     0.671
AKB64967.1
Hypothetical protein.
  
     0.664
AKB64637.1
Hypothetical protein.
  
     0.634
AKB65259.1
Hypothetical protein.
  
     0.620
AKB65225.1
Hypothetical protein.
  
     0.617
AKB63638.1
Hypothetical protein.
  
     0.615
AKB65234.1
ABC transporter, ATP-binding protein.
  
    0.612
AKB66153.1
Hypothetical protein.
  
     0.609
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.