STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65237.1Sodium/glycine symporter GlyP. (463 aa)    
Predicted Functional Partners:
AKB66456.1
CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
    
  0.724
purD
Phosphoribosylamine--glycine ligase; Belongs to the GARS family.
    
 0.689
AKB64554.1
Proton/glutamate symport protein / Sodium/glutamate symport protein.
 
  
 0.620
AKB64004.1
Putative voltage-gated ClC-type chloride channel ClcB.
 
  
 0.595
AKB65236.1
Putative carboxyl-terminal-processing protease, deltaproteobacterial.
       0.496
AKB66315.1
Sodium-solute symporter, putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.475
AKB66336.1
Citrate synthase (si).
  
  
 0.471
AKB66542.1
Acetate permease ActP (cation/acetate symporter); Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.463
AKB65238.1
Hypothetical protein.
       0.461
AKB65936.1
Glutamate transport ATP-binding protein.
  
  
 0.432
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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