AKB65240.1 protein (Methanosarcina mazei) - STRING interaction network

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Score

AKB65240.1

GCN5-related N-acetyltransferase. (171 aa)

Predicted Functional Partners:

rpl23

0.722

rpl18a

0.642

rpl24

0.629

rpl15

0.614

rpl29

0.600

rpl18

0.597

rpl31e

0.595

rpl30e

0.595

AKB65756.1

0.592

rpl32e

0.585

Your Current Organism:

Methanosarcina mazei

NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKB65240.1	AKB65756.1	MSMAS_2044	MSMAS_2560	GCN5-related N-acetyltransferase.	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.592
AKB65240.1	rpl15	MSMAS_2044	MSMAS_2538	GCN5-related N-acetyltransferase.	LSU ribosomal protein L27Ae (L15p); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.614
AKB65240.1	rpl18	MSMAS_2044	MSMAS_2541	GCN5-related N-acetyltransferase.	LSU ribosomal protein L5e (L18p); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.597
AKB65240.1	rpl18a	MSMAS_2044	MSMAS_0497	GCN5-related N-acetyltransferase.	LSU ribosomal protein L18Ae.	0.642
AKB65240.1	rpl23	MSMAS_2044	MSMAS_2558	GCN5-related N-acetyltransferase.	LSU ribosomal protein L23Ae (L23p); Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.	0.722
AKB65240.1	rpl24	MSMAS_2044	MSMAS_2549	GCN5-related N-acetyltransferase.	LSU ribosomal protein L26e (L24p); Located at the polypeptide exit tunnel on the outside of the subunit.	0.629
AKB65240.1	rpl29	MSMAS_2044	MSMAS_2553	GCN5-related N-acetyltransferase.	LSU ribosomal protein L35e (L29p); Belongs to the universal ribosomal protein uL29 family.	0.600
AKB65240.1	rpl30e	MSMAS_2044	MSMAS_2426	GCN5-related N-acetyltransferase.	LSU ribosomal protein L30e; Belongs to the eukaryotic ribosomal protein eL30 family.	0.595
AKB65240.1	rpl31e	MSMAS_2044	MSMAS_0499	GCN5-related N-acetyltransferase.	LSU ribosomal protein L31e; Belongs to the ribosomal protein L31e family.	0.595
AKB65240.1	rpl32e	MSMAS_2044	MSMAS_2543	GCN5-related N-acetyltransferase.	LSU ribosomal protein L32e; Belongs to the eukaryotic ribosomal protein eL32 family.	0.585
AKB65756.1	AKB65240.1	MSMAS_2560	MSMAS_2044	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	GCN5-related N-acetyltransferase.	0.592
AKB65756.1	rpl15	MSMAS_2560	MSMAS_2538	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L27Ae (L15p); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
AKB65756.1	rpl18	MSMAS_2560	MSMAS_2541	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L5e (L18p); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.999
AKB65756.1	rpl18a	MSMAS_2560	MSMAS_0497	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L18Ae.	0.999
AKB65756.1	rpl23	MSMAS_2560	MSMAS_2558	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L23Ae (L23p); Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.	0.999
AKB65756.1	rpl24	MSMAS_2560	MSMAS_2549	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L26e (L24p); Located at the polypeptide exit tunnel on the outside of the subunit.	0.999
AKB65756.1	rpl29	MSMAS_2560	MSMAS_2553	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L35e (L29p); Belongs to the universal ribosomal protein uL29 family.	0.999
AKB65756.1	rpl30e	MSMAS_2560	MSMAS_2426	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L30e; Belongs to the eukaryotic ribosomal protein eL30 family.	0.999
AKB65756.1	rpl31e	MSMAS_2560	MSMAS_0499	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L31e; Belongs to the ribosomal protein L31e family.	0.999
AKB65756.1	rpl32e	MSMAS_2560	MSMAS_2543	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L32e; Belongs to the eukaryotic ribosomal protein eL32 family.	0.999