STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65251.1Putative hydrolase. (264 aa)    
Predicted Functional Partners:
AKB63764.1
Hypothetical protein.
  
 0.750
AKB64424.1
Serine/threonine protein phosphatase BSU1.
  
 0.750
AKB66208.1
2',3'-cyclic nucleotide 3'-phosphodiesterase.
  
 0.750
AKB63214.1
Hypothetical protein.
  
 
 0.660
AKB64479.1
Putative ankyrin repeat protein.
  
 0.654
AKB65503.1
Long-chain-fatty-acid--CoA ligase.
 
 0.571
AKB63891.1
Long-chain-fatty-acid--CoA ligase.
 
 0.568
AKB66128.1
Fumarylacetoacetate hydrolase family protein.
  
 
 0.566
AKB64310.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
 0.562
AKB64655.1
3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.559
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.