STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65323.1Pyruvate formate lyase-activating enzyme 1. (350 aa)    
Predicted Functional Partners:
AKB66113.1
Hypothetical protein; COG1355, Predicted dioxygenase; Belongs to the MEMO1 family.
     0.888
AKB64888.1
Anaerobic ribonucleoside-triphosphate reductase activating protein.
 
  
 0.831
AKB64017.1
Hypothetical protein.
 
     0.789
AKB63568.1
Lysine 2,3-aminomutase.
      
 0.751
AKB65153.1
Alcohol dehydrogenase.
  
 
 0.685
moaA
Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
  
  
 0.486
AKB63750.1
Hypothetical protein.
  
    0.471
AKB65326.1
Ferrous iron transport protein B.
     
 0.455
AKB64545.1
Hypothetical protein.
  
  
 0.435
AKB65324.1
Ferrous iron transport protein A.
       0.429
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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