STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65325.1Ferrous iron transport protein A. (84 aa)    
Predicted Functional Partners:
AKB65326.1
Ferrous iron transport protein B.
 
  
 0.951
AKB65324.1
Ferrous iron transport protein A.
 
     0.848
AKB65327.1
Hypothetical protein.
       0.782
AKB63462.1
Ferrous iron transport protein B.
 
  
 0.779
AKB65328.1
Hypothetical protein.
       0.677
AKB65323.1
Pyruvate formate lyase-activating enzyme 1.
       0.430
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.