STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65375.1Hypothetical protein. (246 aa)    
Predicted Functional Partners:
AKB66341.1
(dimethylallyl)adenosine tRNA methylthiotransferase.
 
  
 0.811
AKB63224.1
Fe-S OXIDOREDUCTASE.
  
  
 0.777
AKB65212.1
BchE/P-methylase family protein.
  
  
 0.777
AKB63585.1
Putative methanogenesis marker protein 17.
  
     0.727
AKB63986.1
UDP-N-acetylmuramoylalanine--D-glutamate ligase.
  
   
 0.694
AKB63589.1
Putative methanogenesis marker protein 3; Belongs to the UPF0288 family.
  
     0.674
AKB64243.1
N5-methyltetrahydromethanopterin:coenzyme M methyltransferase subunit X.
  
     0.662
AKB63266.1
Methyl coenzyme M reductase operon protein D.
  
     0.634
AKB63987.1
Nitrogenase-related protein.
 
     0.629
AKB63588.1
Putative methanogenesis marker protein 6.
  
     0.623
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.