AKB65386.1 protein (Methanosarcina mazei) - STRING interaction network

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Score

AKB65386.1

Putative Zn-ribbon RNA-binding protein with a function in translation. (56 aa)

Predicted Functional Partners:

rpl2

0.999

rps17e

0.953

rps3

0.953

rpl40e

0.945

ef1b

0.942

rpl39e

0.933

rps14

0.928

rps27e

0.928

rps17

0.920

rps19e

0.919

Your Current Organism:

Methanosarcina mazei

NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKB65386.1	ef1b	MSMAS_2190	MSMAS_2189	Putative Zn-ribbon RNA-binding protein with a function in translation.	Translation elongation factor 1 beta subunit; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	0.942
AKB65386.1	rpl2	MSMAS_2190	MSMAS_2557	Putative Zn-ribbon RNA-binding protein with a function in translation.	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.999
AKB65386.1	rpl39e	MSMAS_2190	MSMAS_0500	Putative Zn-ribbon RNA-binding protein with a function in translation.	LSU ribosomal protein L39e; Belongs to the eukaryotic ribosomal protein eL39 family.	0.933
AKB65386.1	rpl40e	MSMAS_2190	MSMAS_0362	Putative Zn-ribbon RNA-binding protein with a function in translation.	LSU ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	0.945
AKB65386.1	rps14	MSMAS_2190	MSMAS_2546	Putative Zn-ribbon RNA-binding protein with a function in translation.	SSU ribosomal protein S29e (S14p); Binds 16S rRNA, required for the assembly of 30S particles.	0.928
AKB65386.1	rps17	MSMAS_2190	MSMAS_2551	Putative Zn-ribbon RNA-binding protein with a function in translation.	SSU ribosomal protein S11e (S17p); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.920
AKB65386.1	rps17e	MSMAS_2190	MSMAS_0112	Putative Zn-ribbon RNA-binding protein with a function in translation.	SSU ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	0.953
AKB65386.1	rps19e	MSMAS_2190	MSMAS_0503	Putative Zn-ribbon RNA-binding protein with a function in translation.	SSU ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.919
AKB65386.1	rps27e	MSMAS_2190	MSMAS_2875	Putative Zn-ribbon RNA-binding protein with a function in translation.	SSU ribosomal protein S27e.	0.928
AKB65386.1	rps3	MSMAS_2190	MSMAS_2554	Putative Zn-ribbon RNA-binding protein with a function in translation.	SSU ribosomal protein S3e (S3p); Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.953
ef1b	AKB65386.1	MSMAS_2189	MSMAS_2190	Translation elongation factor 1 beta subunit; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	Putative Zn-ribbon RNA-binding protein with a function in translation.	0.942
ef1b	rpl2	MSMAS_2189	MSMAS_2557	Translation elongation factor 1 beta subunit; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.990
ef1b	rpl39e	MSMAS_2189	MSMAS_0500	Translation elongation factor 1 beta subunit; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	LSU ribosomal protein L39e; Belongs to the eukaryotic ribosomal protein eL39 family.	0.854
ef1b	rpl40e	MSMAS_2189	MSMAS_0362	Translation elongation factor 1 beta subunit; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	LSU ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	0.914
ef1b	rps14	MSMAS_2189	MSMAS_2546	Translation elongation factor 1 beta subunit; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	SSU ribosomal protein S29e (S14p); Binds 16S rRNA, required for the assembly of 30S particles.	0.785
ef1b	rps17	MSMAS_2189	MSMAS_2551	Translation elongation factor 1 beta subunit; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	SSU ribosomal protein S11e (S17p); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.956
ef1b	rps17e	MSMAS_2189	MSMAS_0112	Translation elongation factor 1 beta subunit; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	SSU ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	0.949
ef1b	rps19e	MSMAS_2189	MSMAS_0503	Translation elongation factor 1 beta subunit; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	SSU ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.966
ef1b	rps27e	MSMAS_2189	MSMAS_2875	Translation elongation factor 1 beta subunit; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	SSU ribosomal protein S27e.	0.902
ef1b	rps3	MSMAS_2189	MSMAS_2554	Translation elongation factor 1 beta subunit; Promotes the exchange of GDP for GTP in EF-1-alpha/GDP, thus allowing the regeneration of EF-1-alpha/GTP that could then be used to form the ternary complex EF-1-alpha/GTP/AAtRNA.	SSU ribosomal protein S3e (S3p); Binds the lower part of the 30S subunit head. Belongs to the universal ribosomal protein uS3 family.	0.979