rps28e protein (Methanosarcina mazei) - STRING interaction network

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Score

rps28e

SSU ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family. (73 aa)

Predicted Functional Partners:

rps19e

0.999

rpl7ae

0.999

rpl24e

0.999

rps6e

0.999

rps14

0.999

rpl2

0.999

rps5

0.998

rps8

0.998

rps4e

0.998

rps17

0.998

Your Current Organism:

Methanosarcina mazei

NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rpl2	rpl24e	MSMAS_2557	MSMAS_2236	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L24e; Binds to the 23S rRNA.	0.999
rpl2	rpl7ae	MSMAS_2557	MSMAS_2234	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	0.999
rpl2	rps14	MSMAS_2557	MSMAS_2546	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S29e (S14p); Binds 16S rRNA, required for the assembly of 30S particles.	0.999
rpl2	rps17	MSMAS_2557	MSMAS_2551	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S11e (S17p); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.999
rpl2	rps19e	MSMAS_2557	MSMAS_0503	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.999
rpl2	rps28e	MSMAS_2557	MSMAS_2235	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.	0.999
rpl2	rps4e	MSMAS_2557	MSMAS_2548	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S4e; Belongs to the eukaryotic ribosomal protein eS4 family.	0.999
rpl2	rps5	MSMAS_2557	MSMAS_2540	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S2e (S5p); With S4 and S12 plays an important role in translational accuracy.	0.999
rpl2	rps6e	MSMAS_2557	MSMAS_2239	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
rpl2	rps8	MSMAS_2557	MSMAS_2545	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S15Ae (S8p); One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.999
rpl24e	rpl2	MSMAS_2236	MSMAS_2557	LSU ribosomal protein L24e; Binds to the 23S rRNA.	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.999
rpl24e	rpl7ae	MSMAS_2236	MSMAS_2234	LSU ribosomal protein L24e; Binds to the 23S rRNA.	LSU ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	0.999
rpl24e	rps14	MSMAS_2236	MSMAS_2546	LSU ribosomal protein L24e; Binds to the 23S rRNA.	SSU ribosomal protein S29e (S14p); Binds 16S rRNA, required for the assembly of 30S particles.	0.990
rpl24e	rps17	MSMAS_2236	MSMAS_2551	LSU ribosomal protein L24e; Binds to the 23S rRNA.	SSU ribosomal protein S11e (S17p); One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.	0.989
rpl24e	rps19e	MSMAS_2236	MSMAS_0503	LSU ribosomal protein L24e; Binds to the 23S rRNA.	SSU ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.994
rpl24e	rps28e	MSMAS_2236	MSMAS_2235	LSU ribosomal protein L24e; Binds to the 23S rRNA.	SSU ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.	0.999
rpl24e	rps4e	MSMAS_2236	MSMAS_2548	LSU ribosomal protein L24e; Binds to the 23S rRNA.	SSU ribosomal protein S4e; Belongs to the eukaryotic ribosomal protein eS4 family.	0.993
rpl24e	rps5	MSMAS_2236	MSMAS_2540	LSU ribosomal protein L24e; Binds to the 23S rRNA.	SSU ribosomal protein S2e (S5p); With S4 and S12 plays an important role in translational accuracy.	0.986
rpl24e	rps6e	MSMAS_2236	MSMAS_2239	LSU ribosomal protein L24e; Binds to the 23S rRNA.	SSU ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.998
rpl24e	rps8	MSMAS_2236	MSMAS_2545	LSU ribosomal protein L24e; Binds to the 23S rRNA.	SSU ribosomal protein S15Ae (S8p); One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.	0.988