rps6e protein (Methanosarcina mazei) - STRING interaction network

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Score

rps6e

SSU ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family. (136 aa)

Predicted Functional Partners:

rps19e

0.999

rps24e

0.999

rpl7ae

0.999

rps28e

0.999

rps4e

0.999

rpl2

0.999

rps17e

0.998

rpl40e

0.998

rpl24e

0.998

rps7

0.998

Your Current Organism:

Methanosarcina mazei

NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rpl2	rpl24e	MSMAS_2557	MSMAS_2236	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L24e; Binds to the 23S rRNA.	0.999
rpl2	rpl40e	MSMAS_2557	MSMAS_0362	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	0.999
rpl2	rpl7ae	MSMAS_2557	MSMAS_2234	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	LSU ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	0.999
rpl2	rps17e	MSMAS_2557	MSMAS_0112	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	0.999
rpl2	rps19e	MSMAS_2557	MSMAS_0503	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.999
rpl2	rps24e	MSMAS_2557	MSMAS_0710	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.	0.999
rpl2	rps28e	MSMAS_2557	MSMAS_2235	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.	0.999
rpl2	rps4e	MSMAS_2557	MSMAS_2548	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S4e; Belongs to the eukaryotic ribosomal protein eS4 family.	0.999
rpl2	rps6e	MSMAS_2557	MSMAS_2239	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.999
rpl2	rps7	MSMAS_2557	MSMAS_2429	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	SSU ribosomal protein S5e (S7p); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family.	0.999
rpl24e	rpl2	MSMAS_2236	MSMAS_2557	LSU ribosomal protein L24e; Binds to the 23S rRNA.	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.999
rpl24e	rpl40e	MSMAS_2236	MSMAS_0362	LSU ribosomal protein L24e; Binds to the 23S rRNA.	LSU ribosomal protein L40e; Belongs to the eukaryotic ribosomal protein eL40 family.	0.998
rpl24e	rpl7ae	MSMAS_2236	MSMAS_2234	LSU ribosomal protein L24e; Binds to the 23S rRNA.	LSU ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs.	0.999
rpl24e	rps17e	MSMAS_2236	MSMAS_0112	LSU ribosomal protein L24e; Binds to the 23S rRNA.	SSU ribosomal protein S17e; Belongs to the eukaryotic ribosomal protein eS17 family.	0.994
rpl24e	rps19e	MSMAS_2236	MSMAS_0503	LSU ribosomal protein L24e; Binds to the 23S rRNA.	SSU ribosomal protein S19e; May be involved in maturation of the 30S ribosomal subunit. Belongs to the eukaryotic ribosomal protein eS19 family.	0.994
rpl24e	rps24e	MSMAS_2236	MSMAS_0710	LSU ribosomal protein L24e; Binds to the 23S rRNA.	SSU ribosomal protein S24e; Belongs to the eukaryotic ribosomal protein eS24 family.	0.996
rpl24e	rps28e	MSMAS_2236	MSMAS_2235	LSU ribosomal protein L24e; Binds to the 23S rRNA.	SSU ribosomal protein S28e; Belongs to the eukaryotic ribosomal protein eS28 family.	0.999
rpl24e	rps4e	MSMAS_2236	MSMAS_2548	LSU ribosomal protein L24e; Binds to the 23S rRNA.	SSU ribosomal protein S4e; Belongs to the eukaryotic ribosomal protein eS4 family.	0.993
rpl24e	rps6e	MSMAS_2236	MSMAS_2239	LSU ribosomal protein L24e; Binds to the 23S rRNA.	SSU ribosomal protein S6e; Belongs to the eukaryotic ribosomal protein eS6 family.	0.998
rpl24e	rps7	MSMAS_2236	MSMAS_2429	LSU ribosomal protein L24e; Binds to the 23S rRNA.	SSU ribosomal protein S5e (S7p); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family.	0.989