Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB65441.1ABC transporter, ATP-binding protein. (330 aa)    
Predicted Functional Partners:
AKB65442.1
ABC transporter, permease protein.
 
 
 0.968
AKB64743.1
Multidrug ABC transporter, permease protein.
 
 
 0.870
AKB65883.1
ABC transporter, permease protein.
 
 
 0.859
AKB63546.1
ABC transporter, permease protein.
 
 
 0.856
AKB64656.1
ABC transporter, permease protein.
 
 
 0.853
AKB65451.1
Hypothetical protein.
  
 0.734
AKB65332.1
ABC transporter, ATP-binding protein.
    
 0.669
AKB65439.1
Dipeptide transport system permease protein DppC; TCDB 3.A.1.5.2.
    
 0.605
AKB65438.1
Oligopeptide transport system permease protein OppB; TCDB 3.A.1.5.1.
    
 0.604
AKB65440.1
Dipeptide transport ATP-binding protein DppD; TCDB 3.A.1.5.2.
    
0.595
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.