STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65492.1Potassium channel protein. (399 aa)    
Predicted Functional Partners:
AKB65491.1
Mg/Co/Ni transporter MgtE.
 
     0.873
AKB65490.1
Mg/Co/Ni transporter MgtE.
 
     0.807
AKB66452.1
Hypothetical protein.
  
     0.649
rpl39e
LSU ribosomal protein L39e; Belongs to the eukaryotic ribosomal protein eL39 family.
  
     0.645
secE
Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
 
     0.609
AKB65530.1
Hypothetical protein.
  
     0.568
AKB66349.1
Integral membrane protein.
  
     0.524
AKB63662.1
Dolichol-P-glucose synthetase.
  
     0.507
AKB64204.1
Hypothetical protein.
  
     0.462
AKB65363.1
DNA-directed RNA polymerase subunit F.
  
     0.456
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.