AKB65495.1 protein (Methanosarcina mazei) - STRING interaction network

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Score

AKB65495.1

Phospholipid-binding protein. (197 aa)

Predicted Functional Partners:

rpl2

0.999

rpl13

0.929

rpl15

0.928

rps10

0.925

rpl10e

0.925

rps2

0.922

AKB65756.1

0.917

rps5

0.916

rps15

0.916

rps9

0.911

Your Current Organism:

Methanosarcina mazei

NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKB65495.1	AKB65756.1	MSMAS_2299	MSMAS_2560	Phospholipid-binding protein.	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.917
AKB65495.1	rpl10e	MSMAS_2299	MSMAS_3191	Phospholipid-binding protein.	LSU ribosomal protein L10e (L16p); Belongs to the universal ribosomal protein uL16 family.	0.925
AKB65495.1	rpl13	MSMAS_2299	MSMAS_2922	Phospholipid-binding protein.	LSU ribosomal protein L13Ae (L13p); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.929
AKB65495.1	rpl15	MSMAS_2299	MSMAS_2538	Phospholipid-binding protein.	LSU ribosomal protein L27Ae (L15p); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.928
AKB65495.1	rpl2	MSMAS_2299	MSMAS_2557	Phospholipid-binding protein.	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.999
AKB65495.1	rps10	MSMAS_2299	MSMAS_2432	Phospholipid-binding protein.	SSU ribosomal protein S20e (S10p); Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.925
AKB65495.1	rps15	MSMAS_2299	MSMAS_2620	Phospholipid-binding protein.	SSU ribosomal protein S13e (S15p).	0.916
AKB65495.1	rps2	MSMAS_2299	MSMAS_2918	Phospholipid-binding protein.	SSU ribosomal protein SAe (S2p); Belongs to the universal ribosomal protein uS2 family.	0.922
AKB65495.1	rps5	MSMAS_2299	MSMAS_2540	Phospholipid-binding protein.	SSU ribosomal protein S2e (S5p); With S4 and S12 plays an important role in translational accuracy.	0.916
AKB65495.1	rps9	MSMAS_2299	MSMAS_2921	Phospholipid-binding protein.	SSU ribosomal protein S16e (S9p); Belongs to the universal ribosomal protein uS9 family.	0.911
AKB65756.1	AKB65495.1	MSMAS_2560	MSMAS_2299	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Phospholipid-binding protein.	0.917
AKB65756.1	rpl10e	MSMAS_2560	MSMAS_3191	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L10e (L16p); Belongs to the universal ribosomal protein uL16 family.	0.999
AKB65756.1	rpl13	MSMAS_2560	MSMAS_2922	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L13Ae (L13p); This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.999
AKB65756.1	rpl15	MSMAS_2560	MSMAS_2538	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L27Ae (L15p); Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.999
AKB65756.1	rpl2	MSMAS_2560	MSMAS_2557	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.999
AKB65756.1	rps10	MSMAS_2560	MSMAS_2432	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S20e (S10p); Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.	0.999
AKB65756.1	rps15	MSMAS_2560	MSMAS_2620	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S13e (S15p).	0.999
AKB65756.1	rps2	MSMAS_2560	MSMAS_2918	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein SAe (S2p); Belongs to the universal ribosomal protein uS2 family.	0.999
AKB65756.1	rps5	MSMAS_2560	MSMAS_2540	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S2e (S5p); With S4 and S12 plays an important role in translational accuracy.	0.999
AKB65756.1	rps9	MSMAS_2560	MSMAS_2921	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S16e (S9p); Belongs to the universal ribosomal protein uS9 family.	0.999