STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65498.1ABC transporter involved in cytochrome c biogenesis, CcmB subunit. (226 aa)    
Predicted Functional Partners:
AKB65499.1
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE.
 
 0.999
AKB65497.1
ABC transporter involved in cytochrome c biogenesis, ATPase component CcmA.
  
  0.979
AKB64389.1
Cytochrome c-type biogenesis protein, archaeal, distantly related to heme lyase subunit CcmF.
 
  
 0.879
AKB63708.1
Hypothetical protein.
  
     0.535
AKB66386.1
Uncharacterized protein conserved in archaea.
 
     0.444
AKB64744.1
ABC transporter, ATP-binding protein.
   
  0.429
AKB65058.1
ABC transporter, ATP-binding protein.
    
  0.420
AKB65441.1
ABC transporter, ATP-binding protein.
   
  0.420
AKB65450.1
ABC transporter, ATP-binding protein.
   
  0.420
AKB65882.1
ABC transporter, ATP-binding protein.
   
  0.420
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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