STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65524.1Inosine 5'-monophosphate dehydrogenase. (291 aa)    
Predicted Functional Partners:
AKB63208.1
Inosine-5'-monophosphate dehydrogenase.
  
    0.604
AKB65525.1
GTP-binding protein, gtp1/obg family.
       0.603
AKB65191.1
ACT-domain-containing protein, predicted allosteric regulator of homoserine dehydrogenase.
  
     0.570
AKB65530.1
Hypothetical protein.
  
     0.544
AKB64051.1
Hypothetical protein.
 
     0.538
AKB65510.1
Hypothetical protein.
  
   
 0.521
AKB64804.1
Hypothetical protein.
  
     0.513
AKB65849.1
Hydrogenase expression/formation protein.
  
     0.492
AKB63209.1
Inosine-5'-monophosphate dehydrogenase.
  
    0.471
AKB64207.1
MarR family protein.
  
     0.460
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.