STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65526.1Hypothetical protein. (311 aa)    
Predicted Functional Partners:
AKB66266.1
Metal transporter, ZIP family.
 
    0.540
AKB65144.1
Putative phosphoglycerate mutase.
 
    0.501
AKB65499.1
Cytochrome c-type biogenesis protein CcmC, putative heme lyase for CcmE.
  
  
 0.481
AKB63861.1
Hypothetical protein.
  
     0.466
AKB63986.1
UDP-N-acetylmuramoylalanine--D-glutamate ligase.
 
    0.427
AKB64033.1
S-layer family duplication domain protein.
 
     0.424
AKB66370.1
Putative transcriptional regulators.
 
   
 0.423
AKB63628.1
RecB family exonuclease.
  
     0.421
AKB63548.1
Hypothetical protein.
  
     0.419
AKB66458.1
Archaeosortase A.
  
    0.418
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.