STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65538.1Hypothetical protein; Belongs to the UPF0212 family. (129 aa)    
Predicted Functional Partners:
AKB65537.1
Cytidine kinase; Belongs to the carbohydrate kinase PfkB family.
 
     0.884
AKB65539.1
Hypothetical protein.
 
     0.814
dphB
Diphthine synthase; S-adenosyl-L-methionine-dependent methyltransferase that catalyzes the trimethylation of the amino group of the modified target histidine residue in translation elongation factor 2 (EF-2), to form an intermediate called diphthine. The three successive methylation reactions represent the second step of diphthamide biosynthesis.
 
     0.734
AKB64051.1
Hypothetical protein.
  
     0.724
AKB63917.1
Hypothetical protein.
  
     0.690
AKB65846.1
Hypothetical protein.
  
     0.689
AKB66452.1
Hypothetical protein.
  
     0.685
AKB63697.1
Hypothetical protein.
  
    0.682
AKB64250.1
Putative Cro-like protein.
 
     0.652
AKB63252.1
Archaeal heat shock regulator, ArsR family.
  
     0.651
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.