STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65555.1Succinate-semialdehyde dehydrogenase [NADP+]. (454 aa)    
Predicted Functional Partners:
AKB64477.1
4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 0.979
AKB66336.1
Citrate synthase (si).
 
 0.934
AKB64818.1
Fumarate hydratase class I, aerobic; L(+)-tartrate dehydratase alpha subunit.
  
 
 0.911
AKB64817.1
Fumarate hydratase class I, aerobic; L(+)-tartrate dehydratase beta subunit.
  
 
 0.910
AKB64080.1
2-oxoglutarate oxidoreductase, beta subunit.
    
 0.890
AKB64079.1
2-oxoglutarate oxidoreductase, alpha subunit.
   
 0.881
AKB65912.1
Malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.878
AKB63494.1
3-isopropylmalate dehydrogenase.
   
 0.839
AKB66049.1
Pyruvate carboxyl transferase subunit A.
   
 0.837
AKB66050.1
Pyruvate carboxyl transferase subunit B.
     
 0.828
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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