STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65571.1Mercury ion binding protein. (51 aa)    
Predicted Functional Partners:
AKB64063.1
Thioredoxin.
     
 0.754
AKB66400.1
Lead, cadmium, zinc and mercury transporting ATPase; Copper-translocating P-type ATPase.
    
 0.488
AKB66500.1
Translation initiation factor IF-2 subunit beta.
     
 0.472
AKB66501.1
Translation initiation factor IF-2 subunit beta.
     
 0.472
AKB66502.1
Translation initiation factor IF-2 subunit beta.
     
 0.472
AKB66503.1
Translation initiation factor IF-2 subunit beta.
     
 0.472
rps12
SSU ribosomal protein S23e (S12p); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.
      
 0.467
AKB65570.1
Heavy-metal-associated protein.
       0.465
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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