STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65572.1Energy-conserving hydrogenase (ferredoxin), subunit F. (123 aa)    
Predicted Functional Partners:
AKB63432.1
Hydrogenase, group 4, HycE subunit, putative.
 
 0.999
AKB65409.1
NADH-quinone oxidoreductase subunit C/D.
  
 0.999
AKB65410.1
NADH-quinone oxidoreductase subunit C/D.
 
 0.999
AKB65408.1
Putative membrane-bound hydrogenase subunit mbhJ; Belongs to the complex I 20 kDa subunit family.
 
 0.990
fpoH
FPO subunit H; FPO shuttles electrons from F(420)H(2), via FAD and iron- sulfur (Fe-S) centers, to quinones in the F(420)H(2):heterodisulfide oxidoreduction chain. The immediate electron acceptor for the enzyme in this species is believed to be methanophenazine. Couples the redox reaction to proton translocation (for every two electrons transferred, 0.9 hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.
 
 0.990
AKB65577.1
Energy-conserving hydrogenase (ferredoxin), subunit A.
 
 0.990
AKB65415.1
NADH:ubiquinone oxidoreductase subunit K.
  
 0.989
AKB65573.1
Energy-conserving hydrogenase (ferredoxin), subunit E.
 
 0.989
AKB65407.1
Hypothetical protein.
  
 0.988
AKB65418.1
NADH:ubiquinone oxidoreductase subunit N.
  
 0.988
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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