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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65573.1Energy-conserving hydrogenase (ferredoxin), subunit E. (358 aa)    
Predicted Functional Partners:
AKB65575.1
Energy-conserving hydrogenase (ferredoxin), subunit C.
 
 0.995
AKB65572.1
Energy-conserving hydrogenase (ferredoxin), subunit F.
 
 0.989
AKB65576.1
Energy-conserving hydrogenase (ferredoxin), subunit B.
 
 0.985
AKB63431.1
Hydrogenase, group 4, HycG subunit, putative.
 0.982
AKB65408.1
Putative membrane-bound hydrogenase subunit mbhJ; Belongs to the complex I 20 kDa subunit family.
   
 0.953
AKB63433.1
Hydrogenase-4 component F.
 
 0.947
AKB63436.1
Hydrogenase, HycC subunit, putative.
 
 0.947
AKB65412.1
Hypothetical protein.
 
 0.934
AKB63435.1
Formate hydrogenlyase subunit 4.
 
 0.924
AKB65574.1
Energy-conserving hydrogenase (ferredoxin), subunit D.
 
     0.917
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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