STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65584.1Methanophenazine hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (591 aa)    
Predicted Functional Partners:
AKB65583.1
Methanophenazine hydrogenase small subunit precursor.
 
 0.993
AKB65710.1
Methanophenazine hydrogenase small subunit precursor.
 
 0.972
AKB65716.1
Methanophenazine hydrogenase small subunit precursor.
 
 0.972
AKB64843.1
Coenzyme F420 hydrogenase subunit gamma.
  
 0.881
AKB65713.1
Methanophenazine hydrogenase maturation protease.
 
 0.869
AKB64111.1
CoB--CoM heterodisulfide reductase subunit A; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
  
 0.861
hypA
[NiFe] hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.
 
 
 0.844
AKB65581.1
[NiFe] hydrogenase metallocenter assembly protein HypD.
 
 
 0.836
AKB63515.1
CoB--CoM heterodisulfide reductase subunit B.
  
 0.796
AKB63516.1
CoB--CoM heterodisulfide reductase subunit C.
  
 0.796
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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