STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65588.1Putative cobalt transporter in sulfate-reducing delta-proteobacteria. (311 aa)    
Predicted Functional Partners:
AKB66458.1
Archaeosortase A.
  
    0.628
AKB63999.1
Hypothetical protein.
  
    0.551
AKB66470.1
Hypothetical protein.
  
    0.547
AKB66250.1
Aldo/keto reductase.
   
    0.544
AKB66035.1
CoB--CoM heterodisulfide reductase 2 subunit E.
  
     0.536
AKB63310.1
Hypothetical protein.
   
    0.526
AKB65587.1
ABC1 family protein.
       0.516
AKB63569.1
Kef-type transport system 2 (probable substrate potassium), subunit 2.
   
    0.509
AKB63573.1
Kef-type transport system 2 (probable substrate potassium), subunit 1.
   
    0.509
AKB65971.1
Glutathione-regulated potassium-efflux system protein KefC.
   
    0.509
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.