rpl30e protein (Methanosarcina mazei) - STRING interaction network

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Score

rpl30e

LSU ribosomal protein L30e; Belongs to the eukaryotic ribosomal protein eL30 family. (98 aa)

Predicted Functional Partners:

rpl2

0.999

rpl15e

0.998

rps12

0.998

rps7

0.998

rpl18

0.998

rpl19e

0.998

rpl24

0.998

rpl22

0.998

AKB65756.1

0.998

rpl31e

0.997

Your Current Organism:

Methanosarcina mazei

NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AKB65756.1	rpl15e	MSMAS_2560	MSMAS_2092	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family.	0.998
AKB65756.1	rpl18	MSMAS_2560	MSMAS_2541	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L5e (L18p); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.999
AKB65756.1	rpl19e	MSMAS_2560	MSMAS_2542	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family.	0.999
AKB65756.1	rpl2	MSMAS_2560	MSMAS_2557	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.999
AKB65756.1	rpl22	MSMAS_2560	MSMAS_2555	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L17e (L22p); The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.999
AKB65756.1	rpl24	MSMAS_2560	MSMAS_2549	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L26e (L24p); Located at the polypeptide exit tunnel on the outside of the subunit.	0.999
AKB65756.1	rpl30e	MSMAS_2560	MSMAS_2426	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L30e; Belongs to the eukaryotic ribosomal protein eL30 family.	0.998
AKB65756.1	rpl31e	MSMAS_2560	MSMAS_0499	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	LSU ribosomal protein L31e; Belongs to the ribosomal protein L31e family.	0.998
AKB65756.1	rps12	MSMAS_2560	MSMAS_2428	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S23e (S12p); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.	0.996
AKB65756.1	rps7	MSMAS_2560	MSMAS_2429	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	SSU ribosomal protein S5e (S7p); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family.	0.996
rpl15e	AKB65756.1	MSMAS_2092	MSMAS_2560	LSU ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family.	LSU ribosomal protein L3e (L3p); One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.998
rpl15e	rpl18	MSMAS_2092	MSMAS_2541	LSU ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family.	LSU ribosomal protein L5e (L18p); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.998
rpl15e	rpl19e	MSMAS_2092	MSMAS_2542	LSU ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family.	LSU ribosomal protein L19e; Binds to the 23S rRNA; Belongs to the eukaryotic ribosomal protein eL19 family.	0.998
rpl15e	rpl2	MSMAS_2092	MSMAS_2557	LSU ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family.	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.999
rpl15e	rpl22	MSMAS_2092	MSMAS_2555	LSU ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family.	LSU ribosomal protein L17e (L22p); The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.	0.997
rpl15e	rpl24	MSMAS_2092	MSMAS_2549	LSU ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family.	LSU ribosomal protein L26e (L24p); Located at the polypeptide exit tunnel on the outside of the subunit.	0.997
rpl15e	rpl30e	MSMAS_2092	MSMAS_2426	LSU ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family.	LSU ribosomal protein L30e; Belongs to the eukaryotic ribosomal protein eL30 family.	0.998
rpl15e	rpl31e	MSMAS_2092	MSMAS_0499	LSU ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family.	LSU ribosomal protein L31e; Belongs to the ribosomal protein L31e family.	0.998
rpl15e	rps12	MSMAS_2092	MSMAS_2428	LSU ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family.	SSU ribosomal protein S23e (S12p); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family.	0.993
rpl15e	rps7	MSMAS_2092	MSMAS_2429	LSU ribosomal protein L15e; Belongs to the eukaryotic ribosomal protein eL15 family.	SSU ribosomal protein S5e (S7p); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family.	0.990