STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65631.1Hypothetical protein. (127 aa)    
Predicted Functional Partners:
AKB65921.1
Hypothetical protein.
  
 
 0.987
AKB65632.1
Uncharacterized protein involved in the oxidation of intracellular sulfur.
    
  0.972
AKB65630.1
Hypothetical protein.
 
     0.848
AKB65629.1
Hypothetical protein.
 
     0.726
AKB65633.1
Hypothetical protein.
       0.700
AKB63319.1
CAAX amino terminal protease family protein.
 
     0.570
AKB64259.1
Thymidylate synthase.
 
     0.546
AKB65597.1
Hypothetical protein.
  
     0.545
AKB63349.1
CAAX amino terminal protease family protein.
 
     0.541
AKB64033.1
S-layer family duplication domain protein.
  
     0.535
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.