STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65670.1Hypothetical protein. (308 aa)    
Predicted Functional Partners:
AKB65673.1
Teichoic acid export ATP-binding protein TagH.
 
  
 0.593
AKB63853.1
Beta-1,3-glucosyltransferase.
 
     0.572
AKB63357.1
Putative N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase.
  
     0.559
AKB65672.1
O-antigen export system permease protein RfbD.
 
  
 0.553
AKB63851.1
Putative glycosyl transferase.
  
     0.537
AKB63337.1
dTDP-glucose 4,6-dehydratase.
 
 
 0.529
AKB63366.1
UDP-glucose 4-epimerase.
 
 
 0.518
AKB63314.1
UDP-glucose 4-epimerase.
 
 
 0.504
AKB65669.1
Glycosyltransferase.
 
 
 0.496
AKB65665.1
Glycosyltransferase.
 
 
 0.463
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: high (86%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.