STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65673.1Teichoic acid export ATP-binding protein TagH. (504 aa)    
Predicted Functional Partners:
AKB65672.1
O-antigen export system permease protein RfbD.
 
 0.999
AKB63330.1
Glucose-1-phosphate thymidylyltransferase.
  
  
 0.847
AKB65674.1
Hypothetical protein.
 
     0.817
AKB65671.1
Glucose-1-phosphate thymidylyltransferase.
     
 0.766
AKB63323.1
Glycosyltransferase.
 
  
 0.694
AKB65670.1
Hypothetical protein.
 
  
 0.593
AKB65785.1
Phospho-N-acetylmuramoyl-pentapeptide- transferase.
  
  
 0.561
AKB63849.1
Mannose-1-phosphate guanylyltransferase (GDP); Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
 
  
 0.549
AKB65664.1
dolichol-P-glucose synthetase, putative.
 
  
 0.547
AKB63357.1
Putative N-acetylgalactosaminyl-diphosphoundecaprenol glucuronosyltransferase.
 
  
 0.516
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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