STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65686.1Hypothetical protein. (269 aa)    
Predicted Functional Partners:
AKB63723.1
Chromosome segregation ATPase.
  
     0.572
AKB66345.1
Uncharacterized protein conserved in archaea (DUF531).
  
     0.538
AKB64561.1
Hypothetical protein.
  
     0.499
AKB63524.1
Hypothetical protein.
  
     0.498
AKB65953.1
Cell surface glycoprotein.
  
     0.489
AKB63441.1
Surface layer protein B.
  
     0.487
AKB65685.1
Hypothetical protein.
       0.485
AKB65225.1
Hypothetical protein.
  
     0.483
AKB63582.1
Matrixin.
  
     0.478
AKB64927.1
Hypothetical protein.
  
     0.475
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.