STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65694.1Type I restriction-modification system, DNA-methyltransferase subunit M. (890 aa)    
Predicted Functional Partners:
AKB65693.1
Type I restriction-modification system, specificity subunit S.
 
 
 0.982
AKB65691.1
Type I restriction-modification system, restriction subunit R.
 
 
 0.975
AKB65173.1
Type I restriction-modification system, restriction subunit R.
 
 
 0.902
AKB64068.1
Type I restriction-modification system, restriction subunit R.
 
 
 0.859
AKB65690.1
Putative metal-dependent hydrolase.
 
     0.851
AKB64737.1
Type I restriction-modification system, specificity subunit S.
 
 
 0.834
AKB65168.1
Type I restriction-modification system specificity subunit.
 
 
 0.817
AKB65692.1
Hypothetical protein.
 
     0.809
AKB65200.1
Type I restriction-modification system, specificity subunit S.
 
 
 0.801
AKB64900.1
Type I restriction-modification system, specificity subunit S.
 
 
 0.792
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.