STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65710.1Methanophenazine hydrogenase small subunit precursor. (403 aa)    
Predicted Functional Partners:
AKB65709.1
Methanophenazine hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.993
AKB65584.1
Methanophenazine hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.972
AKB65715.1
Methanophenazine hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.972
AKB64841.1
Coenzyme F420 hydrogenase subunit alpha.
 
 0.927
AKB65713.1
Methanophenazine hydrogenase maturation protease.
 
 
 0.862
AKB65708.1
Methanophenazine hydrogenase cytochrome b subunit.
     
 0.783
AKB64586.1
Rubredoxin; Belongs to the rubredoxin family.
  
 
 0.761
AKB64842.1
Hydrogenase 1 maturation protease.
 
 
 0.757
AKB64552.1
Iron-sulfur cluster binding protein.
 
 
 0.747
AKB65581.1
[NiFe] hydrogenase metallocenter assembly protein HypD.
 
  
 0.738
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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