STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AKB65716.1Methanophenazine hydrogenase small subunit precursor. (383 aa)    
Predicted Functional Partners:
AKB65715.1
Methanophenazine hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.990
AKB65709.1
Methanophenazine hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.963
AKB65584.1
Methanophenazine hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 0.959
AKB65713.1
Methanophenazine hydrogenase maturation protease.
 
 
 0.915
AKB65710.1
Methanophenazine hydrogenase small subunit precursor.
  
  
 
0.902
AKB64841.1
Coenzyme F420 hydrogenase subunit alpha.
 
 0.889
AKB65714.1
Methanophenazine hydrogenase cytochrome b subunit.
     
 0.733
AKB64842.1
Hydrogenase 1 maturation protease.
 
 
 0.732
AKB65581.1
[NiFe] hydrogenase metallocenter assembly protein HypD.
 
  
 0.723
AKB65578.1
[NiFe] hydrogenase metallocenter assembly protein HypE.
 
   
 0.699
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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