Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKB65380.1 | AKB66105.1 | MSMAS_2184 | MSMAS_2909 | GTPase YlqF. | Gar1 - like small nucleolar rnp. | 0.435 |
| AKB65380.1 | AKB66272.1 | MSMAS_2184 | MSMAS_3076 | GTPase YlqF. | rRNA biogenesis protein Nop5/Nop56. | 0.866 |
| AKB65380.1 | rpl7ae | MSMAS_2184 | MSMAS_2234 | GTPase YlqF. | LSU ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.872 |
| AKB65380.1 | rps15 | MSMAS_2184 | MSMAS_2620 | GTPase YlqF. | SSU ribosomal protein S13e (S15p). | 0.787 |
| AKB65380.1 | truA | MSMAS_2184 | MSMAS_3173 | GTPase YlqF. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family. | 0.459 |
| AKB65380.1 | truB | MSMAS_2184 | MSMAS_2530 | GTPase YlqF. | tRNA pseudouridine 55 synthase; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily. | 0.895 |
| AKB65722.1 | AKB66272.1 | MSMAS_2526 | MSMAS_3076 | DNA-directed RNA polymerase subunit D. | rRNA biogenesis protein Nop5/Nop56. | 0.914 |
| AKB65722.1 | cmk | MSMAS_2526 | MSMAS_2531 | DNA-directed RNA polymerase subunit D. | Cytidylate kinase. | 0.459 |
| AKB65722.1 | infB | MSMAS_2526 | MSMAS_2238 | DNA-directed RNA polymerase subunit D. | Translation initiation factor 2; Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2. | 0.890 |
| AKB65722.1 | rpl7ae | MSMAS_2526 | MSMAS_2234 | DNA-directed RNA polymerase subunit D. | LSU ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.868 |
| AKB65722.1 | rps15 | MSMAS_2526 | MSMAS_2620 | DNA-directed RNA polymerase subunit D. | SSU ribosomal protein S13e (S15p). | 0.996 |
| AKB65722.1 | truA | MSMAS_2526 | MSMAS_3173 | DNA-directed RNA polymerase subunit D. | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family. | 0.921 |
| AKB65722.1 | truB | MSMAS_2526 | MSMAS_2530 | DNA-directed RNA polymerase subunit D. | tRNA pseudouridine 55 synthase; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily. | 0.921 |
| AKB66105.1 | AKB65380.1 | MSMAS_2909 | MSMAS_2184 | Gar1 - like small nucleolar rnp. | GTPase YlqF. | 0.435 |
| AKB66105.1 | AKB66272.1 | MSMAS_2909 | MSMAS_3076 | Gar1 - like small nucleolar rnp. | rRNA biogenesis protein Nop5/Nop56. | 0.927 |
| AKB66105.1 | nop10 | MSMAS_2909 | MSMAS_2877 | Gar1 - like small nucleolar rnp. | Ribosome biogenesis protein Nop10; Involved in ribosome biogenesis; more specifically in 18S rRNA pseudouridylation and in cleavage of pre-rRNA. | 0.999 |
| AKB66105.1 | rpl7ae | MSMAS_2909 | MSMAS_2234 | Gar1 - like small nucleolar rnp. | LSU ribosomal protein L7Ae; Multifunctional RNA-binding protein that recognizes the K- turn motif in ribosomal RNA, the RNA component of RNase P, box H/ACA, box C/D and box C'/D' sRNAs. | 0.994 |
| AKB66105.1 | truB | MSMAS_2909 | MSMAS_2530 | Gar1 - like small nucleolar rnp. | tRNA pseudouridine 55 synthase; Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily. | 0.999 |
| AKB66272.1 | AKB65380.1 | MSMAS_3076 | MSMAS_2184 | rRNA biogenesis protein Nop5/Nop56. | GTPase YlqF. | 0.866 |
| AKB66272.1 | AKB65722.1 | MSMAS_3076 | MSMAS_2526 | rRNA biogenesis protein Nop5/Nop56. | DNA-directed RNA polymerase subunit D. | 0.914 |
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