Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB65770.1Glycosyltransferase. (297 aa)    
Predicted Functional Partners:
AKB65771.1
Hypothetical protein.
       0.776
AKB63839.1
Acetolactate synthase large subunit.
  
 0.647
AKB65078.1
Acetolactate synthase large subunit; Belongs to the TPP enzyme family.
  
 0.647
AKB63368.1
UDP-glucose 6-dehydrogenase.
  
 
 0.616
AKB63840.1
Acetolactate synthase small subunit.
  
 0.610
AKB64636.1
Hypothetical protein.
  
 0.590
AKB63796.1
Hypothetical protein.
  
 0.588
AKB63904.1
TPR-domain containing protein.
  
 0.588
AKB64319.1
Hypothetical protein.
  
 0.588
AKB64369.1
Hypothetical protein.
  
 0.588
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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