STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65770.1Glycosyltransferase. (297 aa)    
Predicted Functional Partners:
AKB65771.1
Hypothetical protein.
       0.776
AKB64636.1
Hypothetical protein.
  
 0.730
AKB63796.1
Hypothetical protein.
  
 0.727
AKB63904.1
TPR-domain containing protein.
  
 0.727
AKB64319.1
Hypothetical protein.
  
 0.727
AKB64369.1
Hypothetical protein.
  
 0.727
AKB64423.1
Cellulose synthase subunit BcsC.
  
 0.727
AKB64427.1
Vi polysaccharide export protein VexE.
  
 0.727
AKB64480.1
GTP cyclohydrolase III (methanopterin).
  
 0.727
AKB64536.1
Hypothetical protein.
  
 0.727
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.