STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB65774.1Glycosyltransferase. (377 aa)    
Predicted Functional Partners:
AKB63330.1
Glucose-1-phosphate thymidylyltransferase.
 
 0.687
AKB65859.1
Putative glycogen debranching enzyme, archaeal type, TIGR01561.
 
 0.602
AKB65152.1
Putative glycogen debranching enzyme, archaeal type, TIGR01561.
 
 0.598
AKB66224.1
Glycosyl transferase, group 1.
 
   
 0.549
AKB64661.1
Membrane protein involved in the export of O-antigen, teichoic acid lipoteichoic acids.
 
  
 0.548
AKB64341.1
Hypothetical protein.
 
 0.542
AKB65096.1
Glycogen debranching enzyme.
 
 0.541
AKB64846.1
Glycogen debranching enzyme.
 
 0.540
AKB63355.1
Glycosyltransferase.
 
     0.534
AKB63362.1
Glycosyltransferase.
  
     0.525
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.