STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65776.1Hypothetical protein. (416 aa)    
Predicted Functional Partners:
AKB65777.1
Heterodisulfide reductase subunit A-like protein.
 
     0.937
AKB65778.1
Hypothetical protein.
 
     0.922
AKB63329.1
Hypothetical protein.
 
     0.610
AKB63850.1
Hypothetical protein.
 
 
 0.581
AKB64835.1
Glycosyltransferase.
 
     0.523
AKB65935.1
Digeranylgeranylglyceryl phosphate synthase.
  
     0.514
AKB66222.1
Hypothetical protein.
 
 
 0.452
AKB63675.1
Hypothetical protein.
  
   
 0.449
AKB64217.1
Membrane alanine aminopeptidase N.
  
     0.442
AKB63375.1
O-antigen flippase Wzx.
 
 
 0.416
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.