Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB65781.1Mobile element protein. (77 aa)    
Predicted Functional Partners:
AKB65782.1
Mobile element protein.
     0.911
AKB63948.1
Mobile element protein.
  
     0.412
AKB64349.1
Mobile element protein.
  
     0.412
AKB64651.1
Mobile element protein.
  
     0.412
AKB65007.1
Mobile element protein.
  
     0.412
AKB65011.1
Mobile element protein.
  
     0.412
AKB63452.1
Mobile element protein.
  
     0.411
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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