STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB65810.1Hypothetical protein. (959 aa)    
Predicted Functional Partners:
AKB65236.1
Putative carboxyl-terminal-processing protease, deltaproteobacterial.
  
     0.514
AKB65259.1
Hypothetical protein.
  
     0.500
AKB64970.1
Hypothetical protein.
  
     0.498
AKB65445.1
Hypothetical protein; Similar to cytochrome C-type biogenesis protein CcdA.
  
     0.498
AKB64496.1
Hypothetical protein.
  
     0.496
AKB64414.1
Hypothetical protein.
  
     0.464
AKB65935.1
Digeranylgeranylglyceryl phosphate synthase.
  
     0.464
AKB65811.1
Hypothetical protein.
       0.460
AKB64582.1
Hypothetical protein.
  
     0.454
AKB65077.1
Hypothetical protein.
  
     0.454
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.