Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
AKB65813.1Iron(III) dicitrate-binding protein. (404 aa)    
Predicted Functional Partners:
AKB65815.1
Iron(III) dicitrate transport ATP-binding protein.
 
 0.999
AKB65814.1
Iron(III) dicitrate transport system permease protein.
 
 0.998
AKB66261.1
Hypothetical protein.
 
    0.810
AKB64676.1
Transcriptional regulator, ArsR family.
  
  
 0.763
AKB65330.1
O-methyltransferase.
 
    0.687
AKB64999.1
N-methylhydantoinase A/acetone carboxylase, beta subunit.
     
 0.667
AKB66262.1
S-adenosyl-L-methionine-binding protein.
 
     0.501
AKB66189.1
Cobalt-precorrin-6y C5-methyltransferase.
 
   
 0.478
AKB65588.1
Putative cobalt transporter in sulfate-reducing delta-proteobacteria.
 
    0.471
cobQ
Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
  
  
 0.463
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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