Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AKB65815.1Iron(III) dicitrate transport ATP-binding protein. (269 aa)    
Predicted Functional Partners:
AKB65813.1
Iron(III) dicitrate-binding protein.
 
 0.999
AKB65814.1
Iron(III) dicitrate transport system permease protein.
 
 0.999
AKB64676.1
Transcriptional regulator, ArsR family.
 
  
 0.799
AKB66525.1
Zinc ABC transporter, periplasmic-binding protein ZnuA.
 
  
 0.764
AKB66523.1
Zinc ABC transporter, inner membrane permease protein ZnuB.
    
 0.746
AKB66261.1
Hypothetical protein.
 
    0.701
hisC
Aspartate aminotransferase / Histidinol-phosphate aminotransferase.
    
  0.682
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
    
 0.616
AKB66268.1
Putative transporter PduT for various metalloporphyrins.
  
  
 0.504
cobS
Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.
    
 0.466
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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