STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65838.1Hypothetical protein. (136 aa)    
Predicted Functional Partners:
AKB65287.1
Hypothetical protein.
  
     0.602
AKB63219.1
Archaeosine tRNA-ribosyltransferase type 2.
 
     0.584
rpl29
LSU ribosomal protein L35e (L29p); Belongs to the universal ribosomal protein uL29 family.
 
     0.579
AKB66121.1
Hypothetical protein.
  
     0.549
AKB65209.1
Hypothetical protein.
  
     0.542
AKB63493.1
Hypothetical protein.
  
     0.541
AKB66163.1
Hypothetical protein.
  
     0.541
AKB63820.1
NMD protein affecting ribosome stability and mRNA decay.
  
    0.509
AKB65844.1
Endoribonuclease Nob1.
  
     0.499
AKB63289.1
Histone acetyltransferase, ELP3 family.
  
     0.497
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.