STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65839.1Biosynthetic Aromatic amino acid aminotransferase alpha / Aspartate aminotransferase. (393 aa)    
Predicted Functional Partners:
AKB65840.1
Leucine responsive regulatory protein.
 
   
 0.884
AKB64128.1
Prephenate dehydratase.
 
 
 0.875
AKB65190.1
Homoserine dehydrogenase.
 
 0.692
AKB66442.1
Aspartokinase; Belongs to the aspartokinase family.
  
 0.653
AKB66284.1
Glutathione-regulated potassium-efflux system ancillary protein KefG.
 
  
 0.591
AKB65912.1
Malate dehydrogenase; Belongs to the LDH/MDH superfamily.
  
 0.574
AKB64395.1
Cysteate synthase; Specifically catalyzes the beta-elimination of phosphate from L-phosphoserine and the beta-addition of sulfite to the dehydroalanine intermediate to produce L-cysteate.
  
 0.563
AKB64310.1
3-oxoacyl-[acyl-carrier protein] reductase.
 
 0.556
AKB64655.1
3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 0.554
ilvE
Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.551
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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