nac protein (Methanosarcina mazei) - STRING interaction network

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nac

Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family. (120 aa)

Predicted Functional Partners:

rpl2

0.991

rpl18e

0.986

rpl31e

0.975

rpl30

0.975

rpl21e

0.971

rpl29

0.965

rpl18

0.961

rpl18a

0.954

rps3ae

0.954

rpl23

0.951

Your Current Organism:

Methanosarcina mazei

NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
nac	rpl18	MSMAS_2666	MSMAS_2541	Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	LSU ribosomal protein L5e (L18p); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	0.961
nac	rpl18a	MSMAS_2666	MSMAS_0497	Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	LSU ribosomal protein L18Ae.	0.954
nac	rpl18e	MSMAS_2666	MSMAS_2923	Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	LSU ribosomal protein L18e; Belongs to the eukaryotic ribosomal protein eL18 family.	0.986
nac	rpl2	MSMAS_2666	MSMAS_2557	Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.991
nac	rpl21e	MSMAS_2666	MSMAS_2168	Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	LSU ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family.	0.971
nac	rpl23	MSMAS_2666	MSMAS_2558	Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	LSU ribosomal protein L23Ae (L23p); Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.	0.951
nac	rpl29	MSMAS_2666	MSMAS_2553	Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	LSU ribosomal protein L35e (L29p); Belongs to the universal ribosomal protein uL29 family.	0.965
nac	rpl30	MSMAS_2666	MSMAS_2539	Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	LSU ribosomal protein L7e (L30p).	0.975
nac	rpl31e	MSMAS_2666	MSMAS_0499	Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	LSU ribosomal protein L31e; Belongs to the ribosomal protein L31e family.	0.975
nac	rps3ae	MSMAS_2666	MSMAS_1115	Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	SSU ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.	0.954
rpl18	nac	MSMAS_2541	MSMAS_2666	LSU ribosomal protein L5e (L18p); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	Nascent polypeptide-associated complex protein; Contacts the emerging nascent chain on the ribosome. Belongs to the NAC-alpha family.	0.961
rpl18	rpl18a	MSMAS_2541	MSMAS_0497	LSU ribosomal protein L5e (L18p); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	LSU ribosomal protein L18Ae.	0.999
rpl18	rpl18e	MSMAS_2541	MSMAS_2923	LSU ribosomal protein L5e (L18p); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	LSU ribosomal protein L18e; Belongs to the eukaryotic ribosomal protein eL18 family.	0.999
rpl18	rpl2	MSMAS_2541	MSMAS_2557	LSU ribosomal protein L5e (L18p); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.	0.999
rpl18	rpl21e	MSMAS_2541	MSMAS_2168	LSU ribosomal protein L5e (L18p); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	LSU ribosomal protein L21e; Belongs to the eukaryotic ribosomal protein eL21 family.	0.999
rpl18	rpl23	MSMAS_2541	MSMAS_2558	LSU ribosomal protein L5e (L18p); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	LSU ribosomal protein L23Ae (L23p); Binds to 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Belongs to the universal ribosomal protein uL23 family.	0.999
rpl18	rpl29	MSMAS_2541	MSMAS_2553	LSU ribosomal protein L5e (L18p); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	LSU ribosomal protein L35e (L29p); Belongs to the universal ribosomal protein uL29 family.	0.999
rpl18	rpl30	MSMAS_2541	MSMAS_2539	LSU ribosomal protein L5e (L18p); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	LSU ribosomal protein L7e (L30p).	0.999
rpl18	rpl31e	MSMAS_2541	MSMAS_0499	LSU ribosomal protein L5e (L18p); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	LSU ribosomal protein L31e; Belongs to the ribosomal protein L31e family.	0.999
rpl18	rps3ae	MSMAS_2541	MSMAS_1115	LSU ribosomal protein L5e (L18p); This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.	SSU ribosomal protein S3Ae; Belongs to the eukaryotic ribosomal protein eS1 family.	0.999