| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AKB63413.1 | AKB65872.1 | MSMAS_0217 | MSMAS_2676 | Hypothetical protein. | Archaeal DNA polymerase I. | 0.948 |
| AKB63413.1 | fen | MSMAS_0217 | MSMAS_0399 | Hypothetical protein. | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] | 0.589 |
| AKB63413.1 | pcn | MSMAS_0217 | MSMAS_3265 | Hypothetical protein. | DNA polymerase sliding clamp protein PCNA; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. | 0.731 |
| AKB63413.1 | polB | MSMAS_0217 | MSMAS_3318 | Hypothetical protein. | Archaeal DNA polymerase II small subunit; Possesses two activities: a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase; Belongs to the DNA polymerase delta/II small subunit family. | 0.403 |
| AKB63413.1 | priL | MSMAS_0217 | MSMAS_3266 | Hypothetical protein. | DNA primase large subunit; Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair. | 0.888 |
| AKB63413.1 | priS | MSMAS_0217 | MSMAS_2872 | Hypothetical protein. | DNA primase small subunit; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. [...] | 0.849 |
| AKB63413.1 | rfcS | MSMAS_0217 | MSMAS_2859 | Hypothetical protein. | Replication factor C small subunit; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcS subfamily. | 0.722 |
| AKB65872.1 | AKB63413.1 | MSMAS_2676 | MSMAS_0217 | Archaeal DNA polymerase I. | Hypothetical protein. | 0.948 |
| AKB65872.1 | AKB66041.1 | MSMAS_2676 | MSMAS_2845 | Archaeal DNA polymerase I. | DNA replication helicase protein MCM; Belongs to the MCM family. | 0.969 |
| AKB65872.1 | dbh | MSMAS_2676 | MSMAS_0420 | Archaeal DNA polymerase I. | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis. | 0.924 |
| AKB65872.1 | dbh-2 | MSMAS_2676 | MSMAS_1841 | Archaeal DNA polymerase I. | DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis. | 0.924 |
| AKB65872.1 | fen | MSMAS_2676 | MSMAS_0399 | Archaeal DNA polymerase I. | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] | 0.988 |
| AKB65872.1 | pcn | MSMAS_2676 | MSMAS_3265 | Archaeal DNA polymerase I. | DNA polymerase sliding clamp protein PCNA; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. | 0.999 |
| AKB65872.1 | polB | MSMAS_2676 | MSMAS_3318 | Archaeal DNA polymerase I. | Archaeal DNA polymerase II small subunit; Possesses two activities: a DNA synthesis (polymerase) and an exonucleolytic activity that degrades single-stranded DNA in the 3' to 5' direction. Has a template-primer preference which is characteristic of a replicative DNA polymerase; Belongs to the DNA polymerase delta/II small subunit family. | 0.999 |
| AKB65872.1 | priL | MSMAS_2676 | MSMAS_3266 | Archaeal DNA polymerase I. | DNA primase large subunit; Regulatory subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Stabilizes and modulates the activity of the small subunit, increasing the rate of DNA synthesis, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. May also play a role in DNA repair. | 0.996 |
| AKB65872.1 | priS | MSMAS_2676 | MSMAS_2872 | Archaeal DNA polymerase I. | DNA primase small subunit; Catalytic subunit of DNA primase, an RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. The small subunit contains the primase catalytic core and has DNA synthesis activity on its own. Binding to the large subunit stabilizes and modulates the activity, increasing the rate of DNA synthesis while decreasing the length of the DNA fragments, and conferring RNA synthesis capability. The DNA polymerase activity may enable DNA primase to also catalyze primer extension after primer synthesis. [...] | 0.994 |
| AKB65872.1 | rfcS | MSMAS_2676 | MSMAS_2859 | Archaeal DNA polymerase I. | Replication factor C small subunit; Part of the RFC clamp loader complex which loads the PCNA sliding clamp onto DNA; Belongs to the activator 1 small subunits family. RfcS subfamily. | 0.884 |
| AKB66041.1 | AKB65872.1 | MSMAS_2845 | MSMAS_2676 | DNA replication helicase protein MCM; Belongs to the MCM family. | Archaeal DNA polymerase I. | 0.969 |
| AKB66041.1 | fen | MSMAS_2845 | MSMAS_0399 | DNA replication helicase protein MCM; Belongs to the MCM family. | Flap structure-specific endonuclease; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. Binds the unpaired 3'-DNA end and kinks the DNA to facilitate 5' cleavage specificity. Cleaves one nucleotide into the double-stranded DNA from the junction in flap DNA, leaving a nick for ligation. Also involved in the base excision repair [...] | 0.864 |
| AKB66041.1 | pcn | MSMAS_2845 | MSMAS_3265 | DNA replication helicase protein MCM; Belongs to the MCM family. | DNA polymerase sliding clamp protein PCNA; Sliding clamp subunit that acts as a moving platform for DNA processing. Responsible for tethering the catalytic subunit of DNA polymerase and other proteins to DNA during high-speed replication. | 0.821 |