STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
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[Homology]
Score
AKB65873.1ChlD component of cobalt chelatase involved in B12 biosynthesis. (692 aa)    
Predicted Functional Partners:
AKB64890.1
Hypothetical protein.
  
 0.965
AKB64739.1
Flavodoxin.
     
  0.957
AKB65878.1
CobN component of cobalt chelatase involved in B12 biosynthesis.
 
 
 0.946
AKB66263.1
CobN-like chelatase BtuS for metalloporphyrine salvage.
 
 
 0.929
AKB66264.1
CobN-like chelatase BtuS for metalloporphyrine salvage.
 
 
 0.929
AKB63666.1
Phytoene dehydrogenase.
 
 
 0.768
AKB65874.1
Hypothetical protein.
       0.726
cobQ
Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.
 
  
  0.687
AKB63502.1
Cobalt-precorrin-8x methylmutase.
 
   
 0.678
hemC
Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.
  
  
 0.667
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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