STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKB65876.1PQQ enzyme repeat domain protein. (474 aa)    
Predicted Functional Partners:
AKB64762.1
Hypothetical protein.
 
 0.928
AKB65380.1
GTPase YlqF.
 
 0.896
AKB64479.1
Putative ankyrin repeat protein.
 
 0.893
AKB64458.1
Deacetylase.
  
 0.877
AKB65093.1
Peptidyl-prolyl cis-trans isomerase.
 
 0.872
AKB66208.1
2',3'-cyclic nucleotide 3'-phosphodiesterase.
 
 0.858
AKB65144.1
Putative phosphoglycerate mutase.
 
 
 0.850
rpl2
LSU ribosomal protein L8e (L2p); One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.
  
 0.850
AKB64806.1
Universal archaeal KH-domain/beta-lactamase-domain protein.
  
 
 0.841
AKB64071.1
Putative exonuclease, DNA ligase-associated.
  
 
 0.840
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
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