Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AKB65882.1ABC transporter, ATP-binding protein. (255 aa)    
Predicted Functional Partners:
AKB65883.1
ABC transporter, permease protein.
 
 
 0.964
AKB66498.1
ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
0.864
AKB64743.1
Multidrug ABC transporter, permease protein.
 
 
 0.854
AKB65881.1
Transmembrane component of general energizing module of ECF transporters.
    
 0.850
AKB65442.1
ABC transporter, permease protein.
 
 
 0.849
AKB63546.1
ABC transporter, permease protein.
 
 
 0.828
AKB64656.1
ABC transporter, permease protein.
 
 
 0.826
AKB65451.1
Hypothetical protein.
  
 0.734
AKB65332.1
ABC transporter, ATP-binding protein.
    
 0.669
AKB65880.1
ATPase component of general energizing module of ECF transporters.
 
  
0.583
Your Current Organism:
Methanosarcina mazei
NCBI taxonomy Id: 213585
Other names: M. mazei S-6, Methanosarcina mazei S-6
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.